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1.
Due to the heavy use of gene synonyms in biomedical text, people have tried many query expansion techniques using synonyms
in order to improve performance in biomedical information retrieval. However, mixed results have been reported. The main challenge
is that it is not trivial to assign appropriate weights to the added gene synonyms in the expanded query; under-weighting
of synonyms would not bring much benefit, while overweighting some unreliable synonyms can hurt performance significantly.
So far, there has been no systematic evaluation of various synonym query expansion strategies for biomedical text. In this
work, we propose two different strategies to extend a standard language modeling approach for gene synonym query expansion
and conduct a systematic evaluation of these methods on all the available TREC biomedical text collections for ad hoc document
retrieval. Our experiment results show that synonym expansion can significantly improve the retrieval accuracy. However, different
query types require different synonym expansion methods, and appropriate weighting of gene names and synonym terms is critical
for improving performance.
相似文献
| Chengxiang ZhaiEmail: |
2.
Smoothing of document language models is critical in language modeling approaches to information retrieval. In this paper,
we present a novel way of smoothing document language models based on propagating term counts probabilistically in a graph
of documents. A key difference between our approach and previous approaches is that our smoothing algorithm can iteratively
propagate counts and achieve smoothing with remotely related documents. Evaluation results on several TREC data sets show that the proposed method significantly outperforms the
simple collection-based smoothing method. Compared with those other smoothing methods that also exploit local corpus structures,
our method is especially effective in improving precision in top-ranked documents through “filling in” missing query terms
in relevant documents, which is attractive since most users only pay attention to the top-ranked documents in search engine
applications.
相似文献
| ChengXiang ZhaiEmail: |
3.
Query Expansion is commonly used in Information Retrieval to overcome vocabulary mismatch issues, such as synonymy between
the original query terms and a relevant document. In general, query expansion experiments exhibit mixed results. Overall TREC
Genomics Track results are also mixed; however, results from the top performing systems provide strong evidence supporting
the need for expansion. In this paper, we examine the conditions necessary for optimal query expansion performance with respect
to two system design issues: IR framework and knowledge source used for expansion. We present a query expansion framework
that improves Okapi baseline passage MAP performance by 185%. Using this framework, we compare and contrast the effectiveness
of a variety of biomedical knowledge sources used by TREC 2006 Genomics Track participants for expansion. Based on the outcome
of these experiments, we discuss the success factors required for effective query expansion with respect to various sources
of term expansion, such as corpus-based cooccurrence statistics, pseudo-relevance feedback methods, and domain-specific and
domain-independent ontologies and databases. Our results show that choice of document ranking algorithm is the most important
factor affecting retrieval performance on this dataset. In addition, when an appropriate ranking algorithm is used, we find
that query expansion with domain-specific knowledge sources provides an equally substantive gain in performance over a baseline
system.
相似文献
| Nicola StokesEmail: Email: |
4.
Precision prediction based on ranked list coherence 总被引：1，自引：0，他引：1
We introduce a statistical measure of the coherence of a list of documents called the clarity score. Starting with a document list ranked by the query-likelihood retrieval model, we demonstrate the score's relationship to query ambiguity with respect to the collection. We also show that the clarity score is correlated with the average precision of a query and lay the groundwork for useful predictions by discussing a method of setting decision thresholds automatically. We then show that passage-based clarity scores correlate with average-precision measures of ranked lists of passages, where a passage is judged relevant if it contains correct answer text, which extends the basic method to passage-based systems. Next, we introduce variants of document-based clarity scores to improve the robustness, applicability, and predictive ability of clarity scores. In particular, we introduce the ranked list clarity score that can be computed with only a ranked list of documents, and the weighted clarity score where query terms contribute more than other terms. Finally, we show an approach to predicting queries that perform poorly on query expansion that uses techniques expanding on the ideas presented earlier.
相似文献
| W. Bruce CroftEmail: |
5.
Arabic documents that are available only in print continue to be ubiquitous and they can be scanned and subsequently OCR’ed
to ease their retrieval. This paper explores the effect of context-based OCR correction on the effectiveness of retrieving
Arabic OCR documents using different index terms. Different OCR correction techniques based on language modeling with different
correction abilities were tested on real OCR and synthetic OCR degradation. Results show that the reduction of word error
rates needs to pass a certain limit to get a noticeable effect on retrieval. If only moderate error reduction is available,
then using short character n-gram for retrieval without error correction is not a bad strategy. Word-based correction in conjunction
with language modeling had a statistically significant impact on retrieval even for character 3-grams, which are known to
be among the best index terms for OCR degraded Arabic text. Further, using a sufficiently large language model for correction
can minimize the need for morphologically sensitive error correction.
相似文献
| Kareem DarwishEmail: |
6.
We present software that generates phrase-based concordances in real-time based on Internet searching. When a user enters
a string of words for which he wants to find concordances, the system sends this string as a query to a search engine and
obtains search results for the string. The concordances are extracted by performing statistical analysis on search results
and then fed back to the user. Unlike existing tools, this concordance consultation tool is language-independent, so concordances
can be obtained even in a language for which there are no well-established analytical methods. Our evaluation has revealed
that concordances can be obtained more effectively than by only using a search engine directly.
相似文献
| Yuichiro IshiiEmail: |
7.
Modeling context through domain ontologies 总被引：1，自引：0，他引：1
Nathalie Hernandez Josiane Mothe Claude Chrisment Daniel Egret 《Information Retrieval》2007,10(2):143-172
Traditional information retrieval systems aim at satisfying most users for most of their searches, leaving aside the context
in which the search takes place. We propose to model two main aspects of context: The themes of the user's information need
and the specific data the user is looking for to achieve the task that has motivated his search. Both aspects are modeled
by means of ontologies. Documents are semantically indexed according to the context representation and the user accesses information
by browsing the ontologies. The model has been applied to a case study that has shown the added value of such a semantic representation
of context.
相似文献
| Daniel EgretEmail: |
8.
Fernando Diaz 《Information Retrieval》2007,10(6):531-562
We adapt the cluster hypothesis for score-based information retrieval by claiming that closely related documents should have
similar scores. Given a retrieval from an arbitrary system, we describe an algorithm which directly optimizes this objective
by adjusting retrieval scores so that topically related documents receive similar scores. We refer to this process as score
regularization. Because score regularization operates on retrieval scores, regardless of their origin, we can apply the technique
to arbitrary initial retrieval rankings. Document rankings derived from regularized scores, when compared to rankings derived
from un-regularized scores, consistently and significantly result in improved performance given a variety of baseline retrieval
algorithms. We also present several proofs demonstrating that regularization generalizes methods such as pseudo-relevance
feedback, document expansion, and cluster-based retrieval. Because of these strong empirical and theoretical results, we argue
for the adoption of score regularization as general design principle or post-processing step for information retrieval systems.
相似文献
| Fernando DiazEmail: |
9.
Index maintenance strategies employed by dynamic text retrieval systems based on inverted files can be divided into two categories:
merge-based and in-place update strategies. Within each category, individual update policies can be distinguished based on
whether they store their on-disk posting lists in a contiguous or in a discontiguous fashion. Contiguous inverted lists, in
general, lead to higher query performance, by minimizing the disk seek overhead at query time, while discontiguous inverted
lists lead to higher update performance, requiring less effort during index maintenance operations. In this paper, we focus
on retrieval systems with high query load, where the on-disk posting lists have to be stored in a contiguous fashion at all
times. We discuss a combination of re-merge and in-place index update, called Hybrid Immediate Merge. The method performs strictly better than the re-merge baseline policy used in our experiments, as it leads to the same query
performance, but substantially better update performance. The actual time savings achievable depend on the size of the text
collection being indexed; a larger collection results in greater savings. In our experiments, variations of Hybrid Immediate Merge were able to reduce the total index update overhead by up to 73% compared to the re-merge baseline.
相似文献
| Stefan BüttcherEmail: |
10.
Content-oriented XML retrieval approaches aim at a more focused retrieval strategy: Instead of retrieving whole documents, document components that are exhaustive to the information need while at the same time being as specific as possible should be retrieved. In this article, we show that the evaluation methods developed for standard retrieval must be modified in order to deal with the structure of XML documents. More precisely, the size and overlap of document components must be taken into account. For this purpose, we propose a new effectiveness metric based on the definition of a concept space defined upon the notions of exhaustiveness and specificity of a search result. We compare the results of this new metric by the results obtained with the official metric used in INEX, the evaluation initiative for content-oriented XML retrieval.
相似文献
| Gabriella KazaiEmail: |
11.
Compound noun segmentation is a key first step in language processing for Korean. Thus far, most approaches require some form of human supervision, such as pre-existing dictionaries, segmented compound nouns, or heuristic rules. As a result, they suffer from the unknown word problem, which can be overcome by unsupervised approaches. However, previous unsupervised methods normally do not consider all possible segmentation candidates, and/or rely on character-based segmentation clues such as bi-grams or all-length n-grams. So, they are prone to falling into a local solution. To overcome the problem, this paper proposes an unsupervised segmentation algorithm that searches the most likely segmentation result from all possible segmentation candidates using a word-based segmentation context. As word-based segmentation clues, a dictionary is automatically generated from a corpus. Experiments using three test collections show that our segmentation algorithm is successfully applied to Korean information retrieval, improving a dictionary-based longest-matching algorithm.
相似文献
| Jong-Hyeok LeeEmail: |
12.
Andrew MacFarlane 《Information Retrieval》2009,12(2):162-178
Understanding of mathematics is needed to underpin the process of search, either explicitly with Exact Match (Boolean logic,
adjacency) or implicitly with Best match natural language search. In this paper we outline some pedagogical challenges in
teaching mathematics for information retrieval (IR) to postgraduate information science students. The aim is to take these
challenges either found by experience or in the literature, to identify both theoretical and practical ideas in order to improve
the delivery of the material and positively affect the learning of the target audience by using a tutorial style of teaching.
Results show that there is evidence to support the notion that a more pro-active style of teaching using tutorials yield benefits
both in terms of assessment results and student satisfaction.
相似文献
| Andrew MacFarlaneEmail: |
13.
On information retrieval metrics designed for evaluation with incomplete relevance assessments 总被引：1，自引：0，他引：1
Modern information retrieval (IR) test collections have grown in size, but the available manpower for relevance assessments
has more or less remained constant. Hence, how to reliably evaluate and compare IR systems using incomplete relevance data, where many documents exist that were never examined by the relevance assessors, is receiving a lot of attention.
This article compares the robustness of IR metrics to incomplete relevance assessments, using four different sets of graded-relevance
test collections with submitted runs—the TREC 2003 and 2004 robust track data and the NTCIR-6 Japanese and Chinese IR data
from the crosslingual task. Following previous work, we artificially reduce the original relevance data to simulate IR evaluation
environments with extremely incomplete relevance data. We then investigate the effect of this reduction on discriminative power, which we define as the proportion of system pairs with a statistically significant difference for a given probability of
Type I Error, and on Kendall’s rank correlation, which reflects the overall resemblance of two system rankings according to two different metrics or two different relevance
data sets. According to these experiments, Q′, nDCG′ and AP′ proposed by Sakai are superior to bpref proposed by Buckley and
Voorhees and to Rank-Biased Precision proposed by Moffat and Zobel. We also point out some weaknesses of bpref and Rank-Biased
Precision by examining their formal definitions.
相似文献
| Noriko KandoEmail: |
14.
On rank-based effectiveness measures and optimization 总被引：1，自引：0，他引：1
Many current retrieval models and scoring functions contain free parameters which need to be set—ideally, optimized. The process
of optimization normally involves some training corpus of the usual document-query-relevance judgement type, and some choice
of measure that is to be optimized. The paper proposes a way to think about the process of exploring the space of parameter
values, and how moving around in this space might be expected to affect different measures. One result, concerning local optima,
is demonstrated for a range of rank-based evaluation measures.
相似文献
| Hugo ZaragozaEmail: |
15.
Document length is widely recognized as an important factor for adjusting retrieval systems. Many models tend to favor the
retrieval of either short or long documents and, thus, a length-based correction needs to be applied for avoiding any length
bias. In Language Modeling for Information Retrieval, smoothing methods are applied to move probability mass from document
terms to unseen words, which is often dependant upon document length. In this article, we perform an in-depth study of this
behavior, characterized by the document length retrieval trends, of three popular smoothing methods across a number of factors,
and its impact on the length of documents retrieved and retrieval performance. First, we theoretically analyze the Jelinek–Mercer,
Dirichlet prior and two-stage smoothing strategies and, then, conduct an empirical analysis. In our analysis we show how Dirichlet
prior smoothing caters for document length more appropriately than Jelinek–Mercer smoothing which leads to its superior retrieval
performance. In a follow up analysis, we posit that length-based priors can be used to offset any bias in the length retrieval
trends stemming from the retrieval formula derived by the smoothing technique. We show that the performance of Jelinek–Mercer
smoothing can be significantly improved by using such a prior, which provides a natural and simple alternative to decouple
the query and document modeling roles of smoothing. With the analysis of retrieval behavior conducted in this article, it
is possible to understand why the Dirichlet Prior smoothing performs better than the Jelinek–Mercer, and why the performance
of the Jelinek–Mercer method is improved by including a length-based prior.
相似文献
| Leif AzzopardiEmail: |
16.
Result merging methods in distributed information retrieval with overlapping databases 总被引：5，自引：0，他引：5
In distributed information retrieval systems, document overlaps occur frequently among different component databases. This
paper presents an experimental investigation and evaluation of a group of result merging methods including the shadow document
method and the multi-evidence method in the environment of overlapping databases. We assume, with the exception of resultant
document lists (either with rankings or scores), no extra information about retrieval servers and text databases is available,
which is the usual case for many applications on the Internet and the Web.
The experimental results show that the shadow document method and the multi-evidence method are the two best methods when
overlap is high, while Round-robin is the best for low overlap. The experiments also show that [0,1] linear normalization
is a better option than linear regression normalization for result merging in a heterogeneous environment.
相似文献
| Sally McCleanEmail: |
17.
Oren Kurland 《Information Retrieval》2009,12(4):437-460
To obtain high precision at top ranks by a search performed in response to a query, researchers have proposed a cluster-based
re-ranking paradigm: clustering an initial list of documents that are the most highly ranked by some initial search, and using
information induced from these (often called) query-specific clusters for re-ranking the list. However, results concerning the effectiveness of various automatic cluster-based re-ranking methods have been inconclusive. We show that using query-specific clusters for automatic re-ranking
of top-retrieved documents is effective with several methods in which clusters play different roles, among which is the smoothing of document language models. We do so by adapting previously-proposed cluster-based retrieval approaches, which are based on (static) query-independent
clusters for ranking all documents in a corpus, to the re-ranking setting wherein clusters are query-specific. The best performing
method that we develop outperforms both the initial document-based ranking and some previously proposed cluster-based re-ranking
approaches; furthermore, this algorithm consistently outperforms a state-of-the-art pseudo-feedback-based approach. In further
exploration we study the performance of cluster-based smoothing methods for re-ranking with various (soft and hard) clustering
algorithms, and demonstrate the importance of clusters in providing context from the initial list through a comparison to
using single documents to this end.
相似文献
| Oren KurlandEmail: |
18.
Features for image retrieval: an experimental comparison 总被引：6，自引：0，他引：6
19.
Fotis Lazarinis Jesús Vilares John Tait Efthimis N. Efthimiadis 《Information Retrieval》2009,12(3):230-250
With increasingly higher numbers of non-English language web searchers the problems of efficient handling of non-English Web
documents and user queries are becoming major issues for search engines. The main aim of this review paper is to make researchers
aware of the existing problems in monolingual non-English Web retrieval by providing an overview of open issues. A significant
number of papers are reviewed and the research issues investigated in these studies are categorized in order to identify the
research questions and solutions proposed in these papers. Further research is proposed at the end of each section.
相似文献
| Efthimis N. EfthimiadisEmail: |
20.
Jun Wang Stephen Robertson Arjen P. de Vries Marcel J. T. Reinders 《Information Retrieval》2008,11(6):477-497
Collaborative filtering is concerned with making recommendations about items to users. Most formulations of the problem are
specifically designed for predicting user ratings, assuming past data of explicit user ratings is available. However, in practice
we may only have implicit evidence of user preference; and furthermore, a better view of the task is of generating a top-N
list of items that the user is most likely to like. In this regard, we argue that collaborative filtering can be directly
cast as a relevance ranking problem. We begin with the classic Probability Ranking Principle of information retrieval, proposing a probabilistic
item ranking framework. In the framework, we derive two different ranking models, showing that despite their common origin,
different factorizations reflect two distinctive ways to approach item ranking. For the model estimations, we limit our discussions
to implicit user preference data, and adopt an approximation method introduced in the classic text retrieval model (i.e. the
Okapi BM25 formula) to effectively decouple frequency counts and presence/absence counts in the preference data. Furthermore,
we extend the basic formula by proposing the Bayesian inference to estimate the probability of relevance (and non-relevance),
which largely alleviates the data sparsity problem. Apart from a theoretical contribution, our experiments on real data sets
demonstrate that the proposed methods perform significantly better than other strong baselines.
相似文献
| Marcel J. T. ReindersEmail: |