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药用植物人参和三七的密码子用法分析
引用本文:倪志华.药用植物人参和三七的密码子用法分析[J].唐山师范学院学报,2012,34(5):54-57.
作者姓名:倪志华
作者单位:福建生物工程职业技术学院保健营养学系,福建福州,350008
摘    要:采用高频密码子分析法,对人参属药用植物人参(PanaxginsengC.A.Mey.)和三七Panax Notoginseng Burk.)F.H.Chen]的蛋白质编码基因序列(coding DNA sequence,CDS)进行了同义密码子相对使用频率(relative frequency of synonymous coden,RFSC)分析,确定了人参高频密码子6个和三七高频密码子7个.将人参和田七的密码子使用频率进行比较,结果显示两者的密码子偏爱性具有较高的一致性.分析结果为外源基因在人参和三七中的表达提供参考.

关 键 词:人参  三七  高频密码子  密码子偏爱性

Analysis of Codon Usage in Panax Ginseng C.A.Mey. and Panax Notoginseng (Burk.) F.H.Chen
NI Zhi-hua.Analysis of Codon Usage in Panax Ginseng C.A.Mey. and Panax Notoginseng (Burk.) F.H.Chen[J].Journal of Tangshan Teachers College,2012,34(5):54-57.
Authors:NI Zhi-hua
Institution:NI Zhi-hua(Department of Nutrition and Health Sciences,Fujian Vocational College of Bioengeering,Fuzhou 350008,China)
Abstract:Fifty-seven coding DNA sequences(CDS) in Panax ginseng C.A.Mey.and twenty-nine coding DNA sequences(CDS) in Panax Notoginseng(Burk.) F.H.Chen were used to analyze the relative frequency of synonymous codon(RFSC),and 6 high-frequency codons in Panax ginseng C.A.Mey.and 7 high-frequency codons in Panax Notoginseng(Burk.) F.H.Chen were revealed by high-frequency codon analysis.When the frequency of codon usage of Panax ginseng C.A.Mey.was compared to Panax Notoginseng(Burk.) F.H.Chen,we found that the codon preference was identical in the two species.The data can be consulted to the research of exogene expression in Panax ginseng C.A.Mey.and Panax Notoginseng(Burk.) F.H.Chen.
Keywords:Panax ginseng C  A  Mey    Panax Notoginseng(Burk  ) F  H  Chen  high-frequency condon  Condon preference
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