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INTRODUCTION It is well-known from the genetic code structure that there exists a connection between codons and physical and chemical amino acid properties (Lewin, 1983). Codon properties in turn are defined by physical properties of the nucleotides from which they are compounded (Ratner, 1985; 2000). The most important properties of nucleotides as complex three-dimensional molecules are their dipole moment, heat of formation and energy of the most stable con- formation (Schneider and Be… 相似文献
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The energy of interaction between complementary nucleotides in promoter sequences of E. coli was calculated and visualized. The graphic method for presentation of energy properties of promoter sequences was elaborated on. Data obtained indicated that energy distribution through the length of promoter sequence results in picture with minima at -35, -8 and ＋7 regions corresponding to areas with elevated AT （adenine-thymine） content. The most important difference from the random sequences area is related to -8. Four promoter groups and their energy properties were revealed. The promoters with minimal and maximal energy of interaction between complementary nucleotides have low strengths, the strongest promoters correspond to promoter clusters characterized by intermediate energy values. 相似文献
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